Book The Best Hotels in Rookery Bay National Estuarine Research Reserve, FL for 2026 from CA $96 - Fully Refundable Options

An aerial view of a coastal area with dense vegetation and a sandy beach.

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Go beyond your typical stay in Rookery Bay National Estuarine Research Reserve

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Our top choices for Rookery Bay National Estuarine Research Reserve hotels

A modern dining area with wicker chairs and tables, large windows, and a ceiling fan.

A golf course with a winding path, sand bunkers, and palm trees.

A swimming pool with lounge chairs, palm trees, and a building with large windows.

A pier extending into the water with two structures at the end, likely accommodations, during sunset.

1. Hampton Inn & Suites Naples South

East Naples

Erica

CA $150

CA $167 total

includes taxes & fees

Oct 13 - Oct 14

A spacious lobby with a large window offering a view of palm trees and a pool. There is a seating area with couches and chairs, and a television mounted on the wall.

A hotel lobby with a large aquarium, seating area, and a framed artwork on the wall.

A modern kitchen area with a central island, built-in appliances, and a seating area with tables and chairs.

A poolside area with lounge chairs, a palm tree, and a thatched-roof structure.

2. Staybridge Suites Naples – Marco Island by IHG

Naples

Alba

CA $185

CA $206 total

includes taxes & fees

Oct 11 - Oct 12

A garden pathway with palm trees, red flowers, and a thatched-roof structure.

A balcony with a view of a calm lake, surrounded by greenery and houses.

A pool area with lounge chairs and a view of a lake.

A modern kitchen with stainless steel appliances, a central island, and a dining area with a sofa and coffee table.

3. Marco Island Lakeside Inn

Marco Island

Rafael

CA $154

CA $171 total

includes taxes & fees

Oct 6 - Oct 7

A hotel room with two beds, a dark wooden headboard, a nightstand with a lamp, and a door with a sign.

A modern office space with a desk, computer, and a television displaying road closures.

A modern coffee station with two coffee dispensers, a coffee pot, and various coffee-related items on a wooden counter.

A Holiday Inn Express building with a modern facade, a covered entrance, and a well-lit exterior.

4. Holiday Inn Express Naples South I-75 by IHG

Rural Estates

Dan

CA $125

CA $139 total

includes taxes & fees

Oct 11 - Oct 12

A multi-story hotel with a covered entrance, palm trees, and a parking lot.

A modern lobby with a reception desk, seating area, and a bar.

A spacious lobby with a modern seating area, a reception desk, and a view of the entrance.

A swimming pool with a curved edge, surrounded by a low fence and lounge chairs.

5. Fairfield Inn & Suites by Marriott Naples

Rural Estates

Katherine

CA $140

CA $155 total

includes taxes & fees

Oct 8 - Oct 9

A resort pool area with a view of the beach and ocean at sunset.

A spacious lobby with a central table, large windows with a view of a pool and palm trees, and a modern chandelier.

A wooden deck with a table and chairs, surrounded by lush greenery and palm trees, overlooking a beach.

A bar area with a view of the ocean, wicker chairs, and a large TV screen.

6. Hilton Marco Island Beach Resort and Spa

South End

Kelly

CA $268

CA $376 total

includes taxes & fees

Oct 12 - Oct 13

A hotel entrance with a covered area, palm trees, and a sign reading "LA QUINTA".

A hotel room with a large bed, a desk with a chair, a dresser, a TV, and a window with curtains.

A rectangular swimming pool with a tiled edge, surrounded by a low fence. There are lounge chairs and umbrellas, and a sign indicating the pool is for guests only.

A counter with a coffee machine, a refrigerator, and a microwave.

7. La Quinta Inn & Suites by Wyndham Naples East (I-75)

Naples

David

CA $100

CA $111 total

includes taxes & fees

Oct 11 - Oct 12

A wooden deck with lounge chairs and a table, a pool, and a building with a balcony.

A kitchen with a dining table, chairs, a microwave, and a coffee maker.

A hotel room with a bed, a desk, and a chair.

An aerial view of a waterfront property with a swimming pool, outdoor seating, and a dock.

8. The Boat House

Olde Marco

Jaci

CA $170

CA $189 total

includes taxes & fees

Oct 6 - Oct 7

A cozy outdoor seating area with a white bench and potted plants, a sign for 'Bijoux' gelateria, and a brick pathway.

A gated entrance to a pool area with a sign indicating pool hours and restrictions.

A bar area with wooden bar counters, stools, and a variety of bottles and glasses.

A poolside area with lounge chairs and umbrellas, surrounded by palm trees.

9. Olde Marco Island Inn and Suites

Olde Marco

Scott

CA $204

CA $392 total

includes taxes & fees

Oct 20 - Oct 21

10. Tollgate Inn

Rural Estates

"Do not stay here! My keys to my room didn't work so someone in my party had to maintain in the room which put a damper on our vacation but since we prepaid for 2 days we didn't want to loose out on 170$ then to.make matters worse the next morning we wake up to find the ceiling started leaking all over my belongings and after complaining to the front desk I then got kicked out and when trying to get a refund got denied and lied on saying we smoked in the room when I traveled with my husband...

Julio

CA $113

CA $125 total

includes taxes & fees

Oct 6 - Oct 7

A modern hotel room with a bed, a sofa, a TV, a desk, and a wardrobe.

An indoor swimming pool with a glass ceiling, surrounded by lounge chairs and a white fence.

A modern hotel lobby with a teal accent wall, a grey sofa, a small ottoman, a kitchen area with a sink and countertop, and a mirror reflecting the space.

A hotel with a flat roof, a sign indicating hotel suites, and a fenced parking area.

11. Everglades Adventures Hotel Suites by Ivey House

Everglades City

Debra

CA $107

CA $119 total

includes taxes & fees

Oct 10 - Oct 11

A covered outdoor area with a stone floor, potted plants, and a neon sign reading "MOTEL welcome".

A dining area with a table set for two, chairs, and a lamp.

A swimming pool with a tiled edge, surrounded by a white lattice fence, and shaded by palm trees.

A garden with various trees and shrubs, including a tall palm tree.

12. Conty's Motel

Naples

Phoenix

CA $87

CA $96 total

includes taxes & fees

Oct 6 - Oct 7

A balcony with a table and chairs, overlooking a beach.

A spacious lobby with a high ceiling, chandeliers, and a reception area.

A sign for Marco Beach Ocean Resort Club Regency with a crest, surrounded by palm trees and red flowers.

A resort with a pool, beach, and ocean view.

13. Marco Beach Ocean Suites

South End

Ian

CA $154

CA $210 total

includes taxes & fees

Oct 13 - Oct 14

A rectangular swimming pool with a tiled edge, surrounded by a white fence, and shaded by palm trees.

A multi-story hotel with a white facade, balconies, and palm trees in the foreground.

A thatched-roof structure with a picnic table in front.

A kitchen with white cabinets, a black countertop, a stove, and a microwave.

14. Captain's Table Hotel

Everglades City

Javier

CA $88

CA $97 total

includes taxes & fees

Oct 8 - Oct 9

A hotel with a sign reading "Woodspring Suites." It has multiple floors, a covered entrance, and palm trees in the foreground.

A modern bathroom with a wooden vanity, a large mirror, and a shower area.

A hotel sign with the number 3786 and the name "Woodspring Suites" indicating an extended stay hotel.

A reception desk with a wooden finish, a white countertop, and a small plant on the counter.

15. WoodSpring Suites Naples East

Rural Estates

Ysel

CA $93

CA $103 total

includes taxes & fees

Oct 6 - Oct 7

A waterfront hotel with multiple balconies, a marina with boats, and lush greenery.

A modern kitchen with a dining area, built-in appliances, and large windows with a view of palm trees.

A resort pool with lounge chairs and palm trees, surrounded by a marina and a body of water.

A modern kitchen with a central island, bar stools, a built-in TV, and a large window offering a view.

16. Hyatt House Naples/5th Avenue

Old Naples

Tanya

CA $265

CA $294 total

includes taxes & fees

Oct 30 - Oct 31

A hotel entrance with a covered walkway, palm trees, and a sign for 'CULTA INN & SUITES'.

A hotel room with two beds, a desk, a chair, a TV, and a large window with curtains.

A covered garden area with a central fountain, surrounded by palm trees and flowering plants.

A hotel lobby with a seating area, a reception desk, and large windows.

17. La Quinta Inn & Suites by Wyndham Naples Downtown

East Naples

Richard

CA $107

CA $119 total

includes taxes & fees

Oct 18 - Oct 19

An outdoor bar area with bamboo ceiling beams, multiple tables and chairs, and a TV screen.

An outdoor patio with tables and chairs, umbrellas, and potted plants.

A spacious lobby with a high ceiling, large windows, and a variety of seating arrangements including sofas and armchairs.

A modern bedroom with a large bed, a sofa, a nightstand, and a view of the city.

18. Bayfront Inn Fifth Avenue

Redevelopment Area

James

CA $144

CA $160 total

includes taxes & fees

Oct 11 - Oct 12

A building with a porch, stairs, and palm trees.

A modern kitchen with a built-in refrigerator, microwave, and coffee maker. There is a glass dining table with chairs.

A living room with teal walls, a ceiling fan, a leather sofa, a glass coffee table, and a lamp.

19. Ivey House Everglades Adventures Hotel

Everglades City

Corey

CA $141

CA $157 total

includes taxes & fees

Oct 6 - Oct 7

A modern hotel building with the name 'Echosuites' prominently displayed. It features a symmetrical facade with evenly spaced windows and a central entrance.

A compact hotel room with a kitchenette, a bed, a desk, and a window with curtains.

A spacious room with a long wooden table and white chairs, a refrigerator stocked with snacks, and a large window offering a view of the outdoors.

A compact kitchenette with a microwave, sink, and wooden cabinets. There is a small desk with a chair and a bed with a window view.

20. Echo Suites Extended Stay By Wyndham Naples

Naples

Rebecca

CA $97

CA $108 total

includes taxes & fees

Oct 7 - Oct 8

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Stay near popular Rookery Bay National Estuarine Research Reserve attractions

South Naples and Marco Island Beaches

9.2/10 (82 reviews)

Why not spend a lazy afternoon at South Naples and Marco Island Beaches during your trip to Naples? Make time to visit the area's shops, or simply enjoy its top-notch restaurants.

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Cannon Beach

Why not spend a lazy afternoon at Cannon Beach during your trip to Naples? Amble around the area's beautiful beaches or seek out the golf courses.

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Rebecca's Cove Beach Park and Landing

Why not spend a lazy afternoon at Rebecca's Cove Beach Park and Landing during your trip to Naples? Wander the beautiful beaches or discover the area's beautiful sunsets.

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Susan's Beach Park and Landing

Why not spend a lazy afternoon at Susan's Beach Park and Landing during your trip to Naples? Stroll along the area's beautiful beaches, or simply savor its top-notch restaurants.

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Briggs Nature Center

10.0/10 (1 review)

Explore the great outdoors at Briggs Nature Center and enjoy the beautiful sunsets during your trip to Naples. Wander the beautiful beaches and seaside in this family-friendly area.

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Learn more about Rookery Bay National Estuarine Research Reserve

Explore attractions like Sand Dollar Island Beach and Landing and Hideaway Beach as you discover things to see and do in Rookery Bay National Estuarine Research Reserve.

See all hotels in Rookery Bay National Estuarine Research Reserve

Top Rookery Bay National Estuarine Research Reserve Hotel Reviews

Hyatt House Naples/5th Avenue

10/10 Excellent

"Clean room, staff,"

Hilton Marco Island Beach Resort and Spa

8/10 Good

"100"

Great Wolf Lodge Naples

10/10 Excellent

"The experience was wonderful."

AC Hotel by Marriott Naples 5th Avenue

8/10 Good

"Clean and spacious room, good location and nice staff!"

Compass by Margaritaville Hotel Naples

10/10 Excellent

"Good vibes great spacious and good price"

JW Marriott Marco Island Beach Resort

8/10 Good

"The resort was gorgeous and the food was great. The staff left a lot to be desired. The valet staff was audibly arguing while delivering our cars. The pool staff was extremely rude and accused my wife of stealing a floater that we had already purchased. Likely won’t be back due to the staff, but man is the resort beautiful."

Hilton Naples

8/10 Good

"Lovely hotel and great amenities"

More cheap stays in Rookery Bay National Estuarine Research Reserve

Conty's Motel

11238 Tamiami Trail East Naples FL

CA $87

CA $96 total

Oct 6 - Oct 7

includes taxes & fees

Red Roof Inn PLUS+ & Suites Naples Downtown-5th Ave S

1925 Davis Blvd Naples FL

CA $100

CA $111 total

Oct 8 - Oct 9

includes taxes & fees

7.4/10 Good! (1,190 reviews)

Best Western Naples Plaza Hotel

6400 Dudley Dr Naples FL

CA $127

CA $141 total

Oct 6 - Oct 7

includes taxes & fees

Hampton Inn Naples Central

Naples FL

CA $139

CA $155 total

Oct 18 - Oct 19

includes taxes & fees

8.8/10 Excellent! (1,006 reviews)

Hampton Inn & Suites Naples South

5146 Tamiami Trail East Naples FL

CA $150

CA $167 total

Oct 13 - Oct 14

includes taxes & fees

Marco Beach Ocean Suites

480 S Collier Blvd Marco Island FL

CA $154

CA $210 total

Oct 13 - Oct 14

includes taxes & fees

Find hotels in Rookery Bay National Estuarine Research Reserve, FL from CA $96

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Rookery Bay National Estuarine Research Reserve

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Rookery Bay National Estuarine Research Reserve hotels

1. Hampton Inn & Suites Naples South

2. Staybridge Suites Naples – Marco Island by IHG

3. Marco Island Lakeside Inn

4. Holiday Inn Express Naples South I-75 by IHG

5. Fairfield Inn & Suites by Marriott Naples

6. Hilton Marco Island Beach Resort and Spa

7. La Quinta Inn & Suites by Wyndham Naples East (I-75)

8. The Boat House

9. Olde Marco Island Inn and Suites

10. Tollgate Inn

11. Everglades Adventures Hotel Suites by Ivey House

12. Conty's Motel

13. Marco Beach Ocean Suites

14. Captain's Table Hotel

15. WoodSpring Suites Naples East

16. Hyatt House Naples/5th Avenue

17. La Quinta Inn & Suites by Wyndham Naples Downtown

18. Bayfront Inn Fifth Avenue

19. Ivey House Everglades Adventures Hotel

20. Echo Suites Extended Stay By Wyndham Naples

Stay near popular Rookery Bay National Estuarine Research Reserve attractions

South Naples and Marco Island Beaches

Cannon Beach

Rebecca's Cove Beach Park and Landing

Susan's Beach Park and Landing

Briggs Nature Center

Learn more about Rookery Bay National Estuarine Research Reserve

Top Rookery Bay National Estuarine Research Reserve Hotel Reviews

Hyatt House Naples/5th Avenue

Hilton Marco Island Beach Resort and Spa

Great Wolf Lodge Naples

AC Hotel by Marriott Naples 5th Avenue

Compass by Margaritaville Hotel Naples

JW Marriott Marco Island Beach Resort

Hilton Naples

More cheap stays in Rookery Bay National Estuarine Research Reserve

Conty's Motel

Red Roof Inn PLUS+ & Suites Naples Downtown-5th Ave S

Best Western Naples Plaza Hotel

Hampton Inn Naples Central

Hampton Inn & Suites Naples South

Marco Beach Ocean Suites

Hotels in Rookery Bay National Estuarine Research Reserve with star rating

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